Welcome to BioRECIPE’s documentation!

Contents

• Introduction
  • Examples
  • BioRECIPE features and use
• Interaction lists
  • Basic element attributes
  • Basic interaction attributes
  • Context attributes
  • Provenance attributes
  • Other attribute definitions
• Executable models
  • Model formats
  • Model attributes
• Formal definitions
  • Directed graph definitions
  • Interaction definitions
  • Model definitions
  • Further notes on element-based models
• Compatibility and translators
  • Attribute compatibility
  • Translators summary
• Biocuration resources
• Acknowledgements
• Citations
• License